Citation: | Ni Haiqiang, Peng Xuan, Gu Shiqi, et al. Down-regulating XBP1s alleviates hypoxia/reoxygenation injury of renal tubular epithelial cells by inhibiting ITPR-mediated mitochondrial dysfunction[J]. ORGAN TRANSPLANTATION, 2024, 15(2): 220-228. doi: 10.3969/j.issn.1674-7445.2023198 |
[1] |
THUILLIER R. Molecular frontiers in transplantation-induced ischemia-reperfusion injury[J]. Int J Mol Sci, 2023, 24(4): 3450. DOI: 10.3390/ijms24043450.
|
[2] |
KELLUM JA, ROMAGNANI P, ASHUNTANTANG G, et al. Acute kidney injury[J]. Nat Rev Dis Primers, 2021, 7(1): 52. DOI: 10.1038/s41572-021-00284-z.
|
[3] |
ZHANG J, WEI X, TANG Z, et al. Elucidating the molecular pathways and immune system transcriptome during ischemia-reperfusion injury in renal transplantation[J]. Int Immunopharmacol, 2020, 81: 106246. DOI: 10.1016/j.intimp.2020.106246.
|
[4] |
DERY KJ, KUPIEC-WEGLINSKI JW. New insights into ischemia-reperfusion injury signaling pathways in organ transplantation[J]. Curr Opin Organ Transplant, 2022, 27(5): 424-433. DOI: 10.1097/MOT.00000000000 01005.
|
[5] |
NIEUWENHUIJS-MOEKE GJ, PISCHKE SE, BERGER SP, et al. Ischemia and reperfusion injury in kidney transplantation: relevant mechanisms in injury and repair[J]. J Clin Med, 2020, 9(1): 253. DOI: 10.3390/jcm9010253.
|
[6] |
叶芃, 程帆. 线粒体在肾脏缺血再灌注损伤中的作用与机制[J]. 医学综述, 2022, 28(4): 643-648. DOI: 10.3969/j.issn.1006-2084.2022.04.004.
YE P, CHENG F. Role and mechanism of mitochondria in renal ischemia-reperfusion injury[J]. Med Recap, 2022, 28(4): 643-648. DOI: 10.3969/j.issn.1006-2084.2022.04.004.
|
[7] |
CHEN Q, KOVILAKATH A, ALLEGOOD J, et al. Endoplasmic reticulum stress and mitochondrial dysfunction during aging: role of sphingolipids[J]. Biochim Biophys Acta Mol Cell Biol Lipids, 2023, 1868(10): 159366. DOI: 10.1016/j.bbalip.2023.159366.
|
[8] |
于露, 李永华. 线粒体相关内质网膜的生物学功能及其在相关疾病中作用的研究进展[J/CD]. 中华诊断学电子杂志, 2022, 10(4): 284-288. DOI: 10.3877/cma.j.issn.2095-655X.2022.04.014.
YU L, LI YH. Research progress on biological function of mitochondria-associated endoplasmic reticulum membranes and its role in related diseases[J/CD]. Chin J Diagn (Electr Edit), 2022, 10(4): 284-288. DOI: 10.3877/cma.j.issn.2095-655X.2022.04.014.
|
[9] |
GAO P, YANG W, SUN L. Mitochondria-associated endoplasmic reticulum membranes (MAMs) and their prospective roles in kidney disease[J]. Oxid Med Cell Longev, 2020: 3120539. DOI: 10.1155/2020/3120539.
|
[10] |
WOLL KA, VAN PETEGEM F. Calcium-release channels: structure and function of IP3 receptors and ryanodine receptors[J]. Physiol Rev, 2022, 102(1): 209-268. DOI: 10.1152/physrev.00033.2020.
|
[11] |
YUAN L, LIU Q, WANG Z, et al. EI24 tethers endoplasmic reticulum and mitochondria to regulate autophagy flux[J]. Cell Mol Life Sci, 2020, 77(8): 1591-1606. DOI: 10.1007/s00018-019-03236-9.
|
[12] |
YUAN M, GONG M, HE J, et al. IP3R1/GRP75/VDAC1 complex mediates endoplasmic reticulum stress-mitochondrial oxidative stress in diabetic atrial remodeling[J]. Redox Biol, 2022, 52: 102289. DOI: 10.1016/j.redox.2022.102289.
|
[13] |
ZIEGLER DV, VINDRIEUX D, GOEHRIG D, et al. Calcium channel ITPR2 and mitochondria-ER contacts promote cellular senescence and aging[J]. Nat Commun, 2021, 12(1): 720. DOI: 10.1038/s41467-021-20993-z.
|
[14] |
MORCIANO G, GIORGI C, BONORA M, et al. Molecular identity of the mitochondrial permeability transition pore and its role in ischemia-reperfusion injury[J]. J Mol Cell Cardiol, 2015, 78: 142-153. DOI: 10.1016/j.yjmcc.2014.08.015.
|
[15] |
NI H, OU Z, WANG Y, et al. XBP1 modulates endoplasmic reticulum and mitochondria crosstalk via regulating NLRP3 in renal ischemia/reperfusion injury[J]. Cell Death Discov, 2023, 9(1): 69. DOI: 10.1038/s41420-023-01360-x.
|
[16] |
ZHANG J, ZHANG J, NI H, et al. Downregulation of XBP1 protects kidney against ischemia-reperfusion injury via suppressing HRD1-mediated NRF2 ubiquitylation[J]. Cell Death Discov, 2021, 7(1): 44. DOI: 10.1038/s41420-021-00425-z.
|
[17] |
LIU H, WANG L, WENG X, et al. Inhibition of Brd4 alleviates renal ischemia/reperfusion injury-induced apoptosis and endoplasmic reticulum stress by blocking FoxO4-mediated oxidative stress[J]. Redox Biol, 2019, 24: 101195. DOI: 10.1016/j.redox.2019.101195.
|
[18] |
SMITH SF, HOSGOOD SA, NICHOLSON ML. Ischemia-reperfusion injury in renal transplantation: 3 key signaling pathways in tubular epithelial cells[J]. Kidney Int, 2019, 95(1): 50-56. DOI: 10.1016/j.kint.2018.10.009.
|
[19] |
KUMAR V, MAITY S. ER Stress-sensor proteins and ER-mitochondrial crosstalk-signaling beyond (ER) stress response[J]. Biomolecules, 2021, 11(2): 173. DOI: 10.3390/biom11020173.
|
[20] |
HUANG R, HUI Z, WEI S, et al. IRE1 signaling regulates chondrocyte apoptosis and death fate in the osteoarthritis[J]. J Cell Physiol, 2022, 237(1): 118-127. DOI: 10.1002/jcp.30537.
|
[21] |
DE RIDDER I, KERKHOFS M, LEMOS FO, et al. The ER-mitochondria interface, where Ca2+ and cell death meet[J]. Cell Calcium, 2023, 112: 102743. DOI: 10.1016/j.ceca.2023.102743.
|
[22] |
HULSURKAR MM, LAHIRI SK, KARCH J, et al. Targeting calcium-mediated inter-organellar crosstalk in cardiac diseases[J]. Expert Opin Ther Targets, 2022, 26(4): 303-317. DOI: 10.1080/14728222.2022.2067479.
|
[23] |
BASSO V, MARCHESAN E, ZIVIANI E. A trio has turned into a quartet: DJ-1 interacts with the IP3R-GRP75-VDAC complex to control ER-mitochondria interaction[J]. Cell Calcium, 2020, 87: 102186. DOI: 10.1016/j.ceca.2020.102186.
|
[24] |
徐王婷, 宋育林. 抑制IP3R-Ca2+途径对对乙酰氨基酚所致肝损伤及其线粒体内质网结构偶联的影响[J]. 安徽医科大学学报, 2023, 58(7): 1077-1081. DOI: 10.19405/j.cnki.issn1000-1492.2023.07.003.
XU WT, SONG YL. The effects of inhibition of the IP3R-Ca2+pathway in APAP-induced liver injury and mitochondrial-associated endoplasmic reticulum membranes[J]. Acta Univ Med Anhui, 2023, 58(7): 1077-1081. DOI: 10.19405/j.cnki.issn1000-1492.2023.07.003.
|
[25] |
PENNA E, ESPINO J, DE STEFANI D, et al. The MCU complex in cell death[J]. Cell Calcium, 2018, 69: 73-80. DOI: 10.1016/j.ceca.2017.08.008.
|
[26] |
史喜德, 郭珊珊. MICU1及其与相关疾病的作用机制[J]. 临床与病理杂志, 2022, 42(7): 1737-1744. DOI: 10.3978/j.issn.2095-6959.2022.07.033.
SHI XD, GUO SS. Mechanism of MICU1 and its related diseases[J]. J Clin Pathol Res, 2022, 42(7): 1737-1744. DOI: 10.3978/j.issn.2095-6959.2022.07.033.
|
[27] |
ARRUDA AP, PERS BM, PARLAKGÜL G, et al. Chronic enrichment of hepatic endoplasmic reticulum-mitochondria contact leads to mitochondrial dysfunction in obesity[J]. Nat Med, 2014, 20(12): 1427-1435. DOI: 10.1038/nm.3735.
|
[28] |
CHU B, LI M, CAO X, et al. IRE1α-XBP1 affects the mitochondrial function of Aβ25-35-treated SH-SY5Y cells by regulating mitochondria-associated endoplasmic reticulum membranes[J]. Front Cell Neurosci, 2021, 15: 614556. DOI: 10.3389/fncel.2021.614556.
|
[29] |
HAJHEIDARI M, HUANG SC. Elucidating the biology of transcription factor-DNA interaction for accurate identification of cis-regulatory elements[J]. Curr Opin Plant Biol, 2022, 68: 102232. DOI: 10.1016/j.pbi.2022.102232.
|
[30] |
INUKAI S, KOCK KH, BULYK ML. Transcription factor-DNA binding: beyond binding site motifs[J]. Curr Opin Genet Dev, 2017, 43: 110-119. DOI: 10.1016/j.gde.2017.02.007.
|
[31] |
WANG P, SU J, WANG J, et al. NRF1 promotes primordial germ cell development, proliferation and survival[J]. Cell Prolif, 2024, 57(1): e13533. DOI: 10.1111/cpr.13533.
|
[32] |
WANG Z, COBAN B, WU H, et al. GRHL2-controlled gene expression networks in luminal breast cancer[J]. Cell Commun Signal, 2023, 21(1): 15. DOI: 10.1186/s12964-022-01029-5.
|
[33] |
ZHANG X, ZHANG C, QIAO M, et al. Depletion of BATF in CAR-T cells enhances antitumor activity by inducing resistance against exhaustion and formation of central memory cells[J]. Cancer Cell, 2022, 40(11): 1407-1422. DOI: 10.1016/j.ccell.2022.09.013.
|
[34] |
颜凤, 邱佳韵, 庄丽丽, 等. 转录因子STAT1对癌症相关基因Gas6的调控研究[J]. 南京医科大学学报(自然科学版), 2023, 43(11): 1487-1493. DOI: 10.7655/NYDXBNS20231102.
YAN F, QIU JY, ZHUANG LL, et al. The regulation of the transcription factor STAT1 to cancer-related gene Gas6[J]. J Nanjing Med Univ(Nat Sci), 2023, 43(11): 1487-1493. DOI: 10.7655/NYDXBNS20231102.
|
[35] |
许晓亮, 刘辉, 武燃, 等. 缺氧诱导因子诱导转录因子COUP-TFⅡ转录激活[J]. 中国老年学杂志, 2022, 42(21): 5298-5303. DOI: 10.3969/j.issn.1005-9202.2022.21.043.
XU XL, LIU H, WU R, et al. Hypoxia inducible factor induces transcriptional activation of transcription factor COUP-TF II[J]. Chin J Gerontol, 2022, 42(21): 5298-5303. DOI: 10.3969/j.issn.1005-9202.2022.21.043.
|
[36] |
HUA C, HUANG J, WANG T, et al. Bacterial transcription factors bind to coding regions and regulate internal cryptic promoters[J]. mBio, 2022, 13(5): e0164322. DOI: 10.1128/mbio.01643-22.
|
[37] |
CHEN H, PUGH BF. What do transcription factors interact with?[J]. J Mol Biol, 2021, 433(14): 166883. DOI: 10.1016/j.jmb.2021.166883.
|
[38] |
ANDREWS G, FAN K, PRATT HE, et al. Mammalian evolution of human cis-regulatory elements and transcription factor binding sites[J]. Science, 2023, 380(6643): eabn7930. DOI: 10.1126/science.abn7930.
|
[39] |
KRIEGER G, LUPO O, WITTKOPP P, et al. Evolution of transcription factor binding through sequence variations and turnover of binding sites[J]. Genome Res, 2022, 32(6): 1099-1111. DOI: 10.1101/gr.276715.122.
|
[40] |
GEORGAKOPOULOS-SOARES I, DENG C, AGARWAL V, et al. Transcription factor binding site orientation and order are major drivers of gene regulatory activity[J]. Nat Commun, 2023, 14(1): 2333. DOI: 10.1038/s41467-023-37960-5.
|
[41] |
WEI S, LI X, LU Z, et al. A transcriptional regulator that boosts grain yields and shortens the growth duration of rice[J]. Science, 2022, 377(6604): eabi8455. DOI: 10.1126/science.abi8455.
|
[42] |
DU Y, LIU L, PENG Y, et al. UNBRANCHED3 expression and inflorescence development is mediated by UNBRANCHED2 and the distal enhancer, KRN4, in maize[J]. PLoS Genet, 2020, 16(4): e1008764. DOI: 10.1371/journal.pgen.1008764.
|